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Clinical

Gene expression analysis related to olive pollen allergy - GSE37157

Purpose

The objective of the study was to use microarray approach to study the major causes of allergic diseases in Mediterranean countries, the olive pollen response, in order to find differential molecular markers among five clinical groups, Non-allergic, Asymptomatic, Allergic but not to olive pollen, Non-treated, olive pollen allergic patients and Olive pollen allergic patients (under specific-immunotherapy).

Hypothesis

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Experimental Design

The study population comprised 28 subjects, selected from a previous immunological study (Aguerri et al. Eur. J. Inflammation 2012, in press), from Andalusia, who were recruited in 2 olive pollen exposure situations: during (April-June) and outside the pollen season (October-December).

Experimental Variables

Olive pollen allergy

Controls

6 non-allergic subjects

Methods

PBMC from the 5 groups, and 6 subjects from each group, were selected for gene-expression analysis: Group 1, non-allergic subjects; Group 2, asymptomatic subjects (diagnosed with olive pollen allergy by skin testing, with no seasonal respiratory symptoms [rhinitis and/or asthma], and who consulted for adverse reaction to drugs); Group 3, patients who were allergic, but not to olive pollen; Group 4, non-treated olive pollen–allergic; and Group 5, olive pollen–allergic patients (receiving olive pollen–specific immunotherapy).

Additional Information

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Microarray
Affymetrix HG-U133_Plus_2
28 Samples Loaded: 28
Human (Homo sapiens)
PBMC
Allergy
PBMCs isolated from peripheral blood by density gradient
Total RNA was isolated from PBMCs (106 cells) using Trizol (Invitrogen, Carlsbad, CA, USA) extraction and isopropyl alcohol precipitation.
Sample Set Spreadsheet
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Samples Preview
Sample ID group period Disease Status
GSM912600 Polinization_Non allergic Polinization Non-allergic
GSM912601 Polinization_Non allergic Polinization Non-allergic
GSM912602 Polinization_Non allergic Polinization Non-allergic
GSM912603 Post polinization_Non allergic Post-polinization Non-allergic
GSM912604 Post polinization_Non allergic Post-polinization Non-allergic
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File
GSE37157_v1.csv
Sample Set Spreadsheet
GSE37157_v1.csv
Sample Set Spreadsheet
GSE37157_v2.csv
Sample Set Spreadsheet
GSE37157_v2.csv
Sample Set Spreadsheet
Log2 Transformed
Raw Signal
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Clinical Datasource
Links

Samples Viewer / Editor

All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.

Sample ID Group Period Disease Status
GSM912600
Polinization_Non allergic
Polinization
Non-allergic
GSM912601
Polinization_Non allergic
Polinization
Non-allergic
GSM912602
Polinization_Non allergic
Polinization
Non-allergic
GSM912603
Post polinization_Non allergic
Post-polinization
Non-allergic
GSM912604
Post polinization_Non allergic
Post-polinization
Non-allergic
GSM912605
Post polinization_Non allergic
Post-polinization
Non-allergic
GSM912606
Polinization_Asymptomatic
Polinization
Asymptomatic
GSM912607
Polinization_Asymptomatic
Polinization
Asymptomatic
GSM912608
Polinization_Asymptomatic
Polinization
Asymptomatic
GSM912609
Post polinization_Asymptomatic
Post-polinization
Asymptomatic
GSM912610
Post polinization_Asymptomatic
Post-polinization
Asymptomatic
GSM912611
Post polinization_Asymptomatic
Post-polinization
Asymptomatic
GSM912612
Polinization_Other allergy
Polinization
Non-related to olive allergic
GSM912613
Polinization_Other allergy
Polinization
Non-related to olive allergic
GSM912614
Post polinization_Other allergy
Post-polinization
Non-related to olive allergic
GSM912615
Post polinization_Other allergy
Post-polinization
Non-related to olive allergic
GSM912616
Polinization_Untreated allergic
Polinization
Untreated allergic
GSM912617
Polinization_Untreated allergic
Polinization
Untreated allergic
GSM912618
Polinization_Untreated allergic
Polinization
Untreated allergic
GSM912619
Post polinization_Untreated allergic
Post-polinization
Untreated allergic
GSM912620
Post polinization_Untreated allergic
Post-polinization
Untreated allergic
GSM912621
Post polinization_Untreated allergic
Post-polinization
Untreated allergic
GSM912622
Polinization_Treated allergic
Polinization
Treated allergic
GSM912623
Polinization_Treated allergic
Polinization
Treated allergic
GSM912624
Polinization_Treated allergic
Polinization
Treated allergic
GSM912625
Post polinization_Treated allergic
Post-polinization
Treated allergic
GSM912626
Post polinization_Treated allergic
Post-polinization
Treated allergic
GSM912627
Post polinization_Treated allergic
Post-polinization
Treated allergic

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