Profiling of human CD4+ T subsets identifies a Th2-specific non-coding RNA GATA3-AS1 - GSE43005
Host defense against diverse pathogens involves the recruitment and differentiation of CD4+ T effector subsets including T helper 1 (Th1), Th2, Th17 and induced regulatory T (Treg) cells. This study aimed to characterize the mRNA and large intergenic non-coding RNA (lincRNA) expression differences between human primary CD4+ T effector subsets and identify potential subset-specific genes.
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Gene expression microarray analysis of flow-cytometry sorted human primary naïve CD4+ T cells, CD4+ T central memory cells, Th1, Th2, Th17 and Treg cells from buffy coat of four healthy controls Gene expression microarray analysis was performed using SurePrint G3 Human Gene Expression 8X60K microarray.
T cell types
4 Healthy controls
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Sample ID | !Sample_title | tissue | cell type |
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GSM1054773 | S2-Naive T | whole blood | Naive T |
GSM1054774 | S2-Memory T | whole blood | CD4+ T central memory |
GSM1054775 | S2-Th1 | whole blood | Th1 |
GSM1054776 | S2-Th2 | whole blood | Th2 |
GSM1054777 | S2-Th17 | whole blood | Th17 |
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Sample ID | !Sample Title | Tissue | Cell type |
---|---|---|---|
GSM1054773 | S2-Naive T |
whole blood |
Naive T |
GSM1054774 | S2-Memory T |
whole blood |
CD4+ T central memory |
GSM1054775 | S2-Th1 |
whole blood |
Th1 |
GSM1054776 | S2-Th2 |
whole blood |
Th2 |
GSM1054777 | S2-Th17 |
whole blood |
Th17 |
GSM1054778 | S2-Treg |
whole blood |
Treg |
GSM1054779 | S1-Naive T |
whole blood |
Naive T |
GSM1054780 | S1-Memory T |
whole blood |
CD4+ T central memory |
GSM1054781 | S3-Naive T |
whole blood |
Naive T |
GSM1054782 | S3-Memory T |
whole blood |
CD4+ T central memory |
GSM1054783 | S3-Th1 |
whole blood |
Th1 |
GSM1054784 | S3-Th2 |
whole blood |
Th2 |
GSM1054785 | S3-Th17 |
whole blood |
Th17 |
GSM1054786 | S3-Treg |
whole blood |
Treg |
GSM1054787 | S1-Th1 |
whole blood |
Th1 |
GSM1054788 | S1-Th2 |
whole blood |
Th2 |
GSM1054789 | S4-Naive T |
whole blood |
Naive T |
GSM1054790 | S4-Memory T |
whole blood |
CD4+ T central memory |
GSM1054791 | S4-Th1 |
whole blood |
Th1 |
GSM1054792 | S4-Th2 |
whole blood |
Th2 |
GSM1054793 | S4-Th17 |
whole blood |
Th17 |
GSM1054794 | S4-Treg |
whole blood |
Treg |
GSM1054795 | S1-Th17 |
whole blood |
Th17 |
GSM1054796 | S1-Treg |
whole blood |
Treg |
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