SIDRA
Sample Set Annotation Tool
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Groups
EXACERBATION
400005507: GSM479047
400005510: GSM479050
400005511: GSM479051
400005512: GSM479052
400005535: GSM479075
400005540: GSM479080
400005553: GSM479093
400005555: GSM479095
400005556: GSM479096
400005570: GSM479110
400005576: GSM479116
400005582: GSM479122
400005588: GSM479128
400005591: GSM479131
400005595: GSM479135
400005596: GSM479136
400005597: GSM479137
400005599: GSM479139
400005600: GSM479140
400005603: GSM479143
400005608: GSM479148
400005610: GSM479150
400005616: GSM479156
400005622: GSM479162
400005625: GSM479165
400005630: GSM479170
400005631: GSM479171
400005635: GSM479175
400005638: GSM479178
400005647: GSM479187
400005650: GSM479190
400005651: GSM479191
400005654: GSM479194
400005655: GSM479195
400005662: GSM479202
400005666: GSM479206
400005671: GSM479211
400005675: GSM479215
400005680: GSM479220
400005685: GSM479225
400005688: GSM479228
400005693: GSM479233
400005698: GSM479238
400005699: GSM479239
400005700: GSM479240
400005701: GSM479241
400005703: GSM479243
400005706: GSM479246
400005709: GSM479249
400005712: GSM479252
400005713: GSM479253
400005718: GSM479258
400005719: GSM479259
400005721: GSM479261
400005724: GSM479264
400005727: GSM479267
400005732: GSM479272
400005735: GSM479275
400005737: GSM479277
400005739: GSM479279
400005744: GSM479284
400005745: GSM479285
400005746: GSM479286
400005748: GSM479288
400005751: GSM479291
400005756: GSM479296
400005759: GSM479299
400005761: GSM479301
400005763: GSM479303
400005773: GSM479313
400005774: GSM479314
400005783: GSM479323
400005793: GSM479333
400005796: GSM479336
400005802: GSM479342
400005806: GSM479346
400005808: GSM479348
400005814: GSM479354
400005821: GSM479361
400005822: GSM479362
400005823: GSM479363
400005824: GSM479364
400005826: GSM479366
400005830: GSM479370
400005835: GSM479375
400005838: GSM479378
400005839: GSM479379
400005840: GSM479380
400005848: GSM479388
400005861: GSM479401
400005862: GSM479402
400005871: GSM479411
400005873: GSM479413
400005874: GSM479414
400005886: GSM479426
400005893: GSM479433
400005917: GSM479457
400005923: GSM479463
400005925: GSM479465
400005932: GSM479472
400005936: GSM479476
400005940: GSM479480
400005943: GSM479483
400005944: GSM479484
400005946: GSM479486
400005948: GSM479488
400005950: GSM479490
400005952: GSM479492
400005958: GSM479498
400005959: GSM479499
400005964: GSM479504
400005968: GSM479508
400005981: GSM479521
400005984: GSM479524
400005986: GSM479526
400005987: GSM479527
400005994: GSM479534
400005998: GSM479538
400005999: GSM479539
400006002: GSM479542
400006003: GSM479543
400006004: GSM479544
400006007: GSM479547
400006012: GSM479552
400006014: GSM479554
400006018: GSM479558
400006023: GSM479563
400006026: GSM479566
400006032: GSM479572
400006036: GSM479576
400006037: GSM479577
400006038: GSM479578
400006044: GSM479584
400006045: GSM479585
400006052: GSM479592
400006053: GSM479593
400006057: GSM479597
400006058: GSM479598
400006060: GSM479600
400006064: GSM479604
400006073: GSM479613
400006087: GSM479627
400006088: GSM479628
400006090: GSM479630
400006096: GSM479636
400006097: GSM479637
400006101: GSM479641
400006104: GSM479644
400006111: GSM479656
400006113: GSM479661
400006117: GSM479665
400006120: GSM479668
400006132: GSM479680
400006134: GSM479682
400006137: GSM479685
400006139: GSM479687
400006142: GSM479690
400006149: GSM479697
400006150: GSM479698
400006151: GSM479699
400006161: GSM479709
400006162: GSM479710
400006167: GSM479715
400006169: GSM479717
400006177: GSM479725
400006181: GSM479729
0
samples selected
Move selected samples to group
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400005505: GSM479045
400005508: GSM479048
400005515: GSM479055
400005516: GSM479056
400005517: GSM479057
400005523: GSM479063
400005524: GSM479064
400005527: GSM479067
400005532: GSM479072
400005533: GSM479073
400005542: GSM479082
400005544: GSM479084
400005547: GSM479087
400005549: GSM479089
400005551: GSM479091
400005560: GSM479100
400005563: GSM479103
400005565: GSM479105
400005574: GSM479114
400005581: GSM479121
400005585: GSM479125
400005594: GSM479134
400005612: GSM479152
400005614: GSM479154
400005617: GSM479157
400005620: GSM479160
400005623: GSM479163
400005624: GSM479164
400005637: GSM479177
400005640: GSM479180
400005644: GSM479184
400005645: GSM479185
400005646: GSM479186
400005659: GSM479199
400005663: GSM479203
400005670: GSM479210
400005679: GSM479219
400005689: GSM479229
400005694: GSM479234
400005696: GSM479236
400005702: GSM479242
400005708: GSM479248
400005711: GSM479251
400005722: GSM479262
400005734: GSM479274
400005738: GSM479278
400005750: GSM479290
400005757: GSM479297
400005760: GSM479300
400005765: GSM479305
400005776: GSM479316
400005779: GSM479319
400005780: GSM479320
400005787: GSM479327
400005795: GSM479335
400005807: GSM479347
400005813: GSM479353
400005819: GSM479359
400005831: GSM479371
400005832: GSM479372
400005834: GSM479374
400005842: GSM479382
400005844: GSM479384
400005853: GSM479393
400005856: GSM479396
400005859: GSM479399
400005865: GSM479405
400005868: GSM479408
400005880: GSM479420
400005882: GSM479422
400005889: GSM479429
400005890: GSM479430
400005891: GSM479431
400005896: GSM479436
400005899: GSM479439
400005901: GSM479441
400005902: GSM479442
400005909: GSM479449
400005913: GSM479453
400005919: GSM479459
400005920: GSM479460
400005928: GSM479468
400005931: GSM479471
400005947: GSM479487
400005955: GSM479495
400005957: GSM479497
400005970: GSM479510
400005972: GSM479512
400005976: GSM479516
400005983: GSM479523
400005988: GSM479528
400005997: GSM479537
400006006: GSM479546
400006013: GSM479553
400006015: GSM479555
400006025: GSM479565
400006028: GSM479568
400006034: GSM479574
400006067: GSM479607
400006068: GSM479608
400006069: GSM479609
400006074: GSM479614
400006079: GSM479619
400006086: GSM479626
400006093: GSM479633
400006099: GSM479639
400006103: GSM479643
400006107: GSM479647
400006110: GSM479653
400006114: GSM479662
400006119: GSM479667
400006121: GSM479669
400006124: GSM479672
400006128: GSM479676
400006131: GSM479679
400006135: GSM479683
400006143: GSM479691
400006144: GSM479692
400006147: GSM479695
400006157: GSM479705
400006165: GSM479713
400006168: GSM479716
400006171: GSM479719
400006175: GSM479723
400006176: GSM479724
0
samples selected
Move selected samples to group
EXACERBATION
QUIET
Move
Create sample set from this group
QUIET
400005497: GSM479037
400005498: GSM479038
400005499: GSM479039
400005500: GSM479040
400005501: GSM479041
400005502: GSM479042
400005503: GSM479043
400005504: GSM479044
400005506: GSM479046
400005509: GSM479049
400005513: GSM479053
400005514: GSM479054
400005518: GSM479058
400005519: GSM479059
400005520: GSM479060
400005521: GSM479061
400005522: GSM479062
400005525: GSM479065
400005526: GSM479066
400005528: GSM479068
400005529: GSM479069
400005530: GSM479070
400005531: GSM479071
400005534: GSM479074
400005536: GSM479076
400005537: GSM479077
400005538: GSM479078
400005539: GSM479079
400005541: GSM479081
400005543: GSM479083
400005545: GSM479085
400005546: GSM479086
400005548: GSM479088
400005550: GSM479090
400005552: GSM479092
400005554: GSM479094
400005557: GSM479097
400005558: GSM479098
400005559: GSM479099
400005561: GSM479101
400005562: GSM479102
400005564: GSM479104
400005566: GSM479106
400005567: GSM479107
400005568: GSM479108
400005569: GSM479109
400005571: GSM479111
400005572: GSM479112
400005573: GSM479113
400005575: GSM479115
400005577: GSM479117
400005578: GSM479118
400005579: GSM479119
400005580: GSM479120
400005583: GSM479123
400005584: GSM479124
400005586: GSM479126
400005587: GSM479127
400005589: GSM479129
400005590: GSM479130
400005592: GSM479132
400005593: GSM479133
400005598: GSM479138
400005601: GSM479141
400005602: GSM479142
400005604: GSM479144
400005605: GSM479145
400005606: GSM479146
400005607: GSM479147
400005609: GSM479149
400005611: GSM479151
400005613: GSM479153
400005615: GSM479155
400005618: GSM479158
400005619: GSM479159
400005621: GSM479161
400005626: GSM479166
400005627: GSM479167
400005628: GSM479168
400005629: GSM479169
400005632: GSM479172
400005633: GSM479173
400005634: GSM479174
400005636: GSM479176
400005639: GSM479179
400005641: GSM479181
400005642: GSM479182
400005643: GSM479183
400005648: GSM479188
400005649: GSM479189
400005652: GSM479192
400005653: GSM479193
400005656: GSM479196
400005657: GSM479197
400005658: GSM479198
400005660: GSM479200
400005661: GSM479201
400005664: GSM479204
400005665: GSM479205
400005667: GSM479207
400005668: GSM479208
400005669: GSM479209
400005672: GSM479212
400005673: GSM479213
400005674: GSM479214
400005676: GSM479216
400005677: GSM479217
400005678: GSM479218
400005681: GSM479221
400005682: GSM479222
400005683: GSM479223
400005684: GSM479224
400005686: GSM479226
400005687: GSM479227
400005690: GSM479230
400005691: GSM479231
400005692: GSM479232
400005695: GSM479235
400005697: GSM479237
400005704: GSM479244
400005705: GSM479245
400005707: GSM479247
400005710: GSM479250
400005714: GSM479254
400005715: GSM479255
400005716: GSM479256
400005717: GSM479257
400005720: GSM479260
400005723: GSM479263
400005725: GSM479265
400005726: GSM479266
400005728: GSM479268
400005729: GSM479269
400005730: GSM479270
400005731: GSM479271
400005733: GSM479273
400005736: GSM479276
400005740: GSM479280
400005741: GSM479281
400005742: GSM479282
400005743: GSM479283
400005747: GSM479287
400005749: GSM479289
400005752: GSM479292
400005753: GSM479293
400005754: GSM479294
400005755: GSM479295
400005758: GSM479298
400005762: GSM479302
400005764: GSM479304
400005766: GSM479306
400005767: GSM479307
400005768: GSM479308
400005769: GSM479309
400005770: GSM479310
400005771: GSM479311
400005772: GSM479312
400005775: GSM479315
400005777: GSM479317
400005778: GSM479318
400005781: GSM479321
400005782: GSM479322
400005784: GSM479324
400005785: GSM479325
400005786: GSM479326
400005788: GSM479328
400005789: GSM479329
400005790: GSM479330
400005791: GSM479331
400005792: GSM479332
400005794: GSM479334
400005797: GSM479337
400005798: GSM479338
400005799: GSM479339
400005800: GSM479340
400005801: GSM479341
400005803: GSM479343
400005804: GSM479344
400005805: GSM479345
400005809: GSM479349
400005810: GSM479350
400005811: GSM479351
400005812: GSM479352
400005815: GSM479355
400005816: GSM479356
400005817: GSM479357
400005818: GSM479358
400005820: GSM479360
400005825: GSM479365
400005827: GSM479367
400005828: GSM479368
400005829: GSM479369
400005833: GSM479373
400005836: GSM479376
400005837: GSM479377
400005841: GSM479381
400005843: GSM479383
400005845: GSM479385
400005846: GSM479386
400005847: GSM479387
400005849: GSM479389
400005850: GSM479390
400005851: GSM479391
400005852: GSM479392
400005854: GSM479394
400005855: GSM479395
400005857: GSM479397
400005858: GSM479398
400005860: GSM479400
400005863: GSM479403
400005864: GSM479404
400005866: GSM479406
400005867: GSM479407
400005869: GSM479409
400005870: GSM479410
400005872: GSM479412
400005875: GSM479415
400005876: GSM479416
400005877: GSM479417
400005878: GSM479418
400005879: GSM479419
400005881: GSM479421
400005883: GSM479423
400005884: GSM479424
400005885: GSM479425
400005887: GSM479427
400005888: GSM479428
400005892: GSM479432
400005894: GSM479434
400005895: GSM479435
400005897: GSM479437
400005898: GSM479438
400005900: GSM479440
400005903: GSM479443
400005904: GSM479444
400005905: GSM479445
400005906: GSM479446
400005907: GSM479447
400005908: GSM479448
400005910: GSM479450
400005911: GSM479451
400005912: GSM479452
400005914: GSM479454
400005915: GSM479455
400005916: GSM479456
400005918: GSM479458
400005921: GSM479461
400005922: GSM479462
400005924: GSM479464
400005926: GSM479466
400005927: GSM479467
400005929: GSM479469
400005930: GSM479470
400005933: GSM479473
400005934: GSM479474
400005935: GSM479475
400005937: GSM479477
400005938: GSM479478
400005939: GSM479479
400005941: GSM479481
400005942: GSM479482
400005945: GSM479485
400005949: GSM479489
400005951: GSM479491
400005953: GSM479493
400005954: GSM479494
400005956: GSM479496
400005960: GSM479500
400005961: GSM479501
400005962: GSM479502
400005963: GSM479503
400005965: GSM479505
400005966: GSM479506
400005967: GSM479507
400005969: GSM479509
400005971: GSM479511
400005973: GSM479513
400005974: GSM479514
400005975: GSM479515
400005977: GSM479517
400005978: GSM479518
400005979: GSM479519
400005980: GSM479520
400005982: GSM479522
400005985: GSM479525
400005989: GSM479529
400005990: GSM479530
400005991: GSM479531
400005992: GSM479532
400005993: GSM479533
400005995: GSM479535
400005996: GSM479536
400006000: GSM479540
400006001: GSM479541
400006005: GSM479545
400006008: GSM479548
400006009: GSM479549
400006010: GSM479550
400006011: GSM479551
400006016: GSM479556
400006017: GSM479557
400006019: GSM479559
400006020: GSM479560
400006021: GSM479561
400006022: GSM479562
400006024: GSM479564
400006027: GSM479567
400006029: GSM479569
400006030: GSM479570
400006031: GSM479571
400006033: GSM479573
400006035: GSM479575
400006039: GSM479579
400006040: GSM479580
400006041: GSM479581
400006042: GSM479582
400006043: GSM479583
400006046: GSM479586
400006047: GSM479587
400006048: GSM479588
400006049: GSM479589
400006050: GSM479590
400006051: GSM479591
400006054: GSM479594
400006055: GSM479595
400006056: GSM479596
400006059: GSM479599
400006061: GSM479601
400006062: GSM479602
400006063: GSM479603
400006065: GSM479605
400006066: GSM479606
400006070: GSM479610
400006071: GSM479611
400006072: GSM479612
400006075: GSM479615
400006076: GSM479616
400006077: GSM479617
400006078: GSM479618
400006080: GSM479620
400006081: GSM479621
400006082: GSM479622
400006083: GSM479623
400006084: GSM479624
400006085: GSM479625
400006089: GSM479629
400006091: GSM479631
400006092: GSM479632
400006094: GSM479634
400006095: GSM479635
400006098: GSM479638
400006100: GSM479640
400006102: GSM479642
400006105: GSM479645
400006106: GSM479646
400006108: GSM479649
400006109: GSM479651
400006112: GSM479658
400006115: GSM479663
400006116: GSM479664
400006118: GSM479666
400006122: GSM479670
400006123: GSM479671
400006125: GSM479673
400006126: GSM479674
400006127: GSM479675
400006129: GSM479677
400006130: GSM479678
400006133: GSM479681
400006136: GSM479684
400006138: GSM479686
400006140: GSM479688
400006141: GSM479689
400006145: GSM479693
400006146: GSM479694
400006148: GSM479696
400006152: GSM479700
400006153: GSM479701
400006154: GSM479702
400006155: GSM479703
400006156: GSM479704
400006158: GSM479706
400006159: GSM479707
400006160: GSM479708
400006163: GSM479711
400006164: GSM479712
400006166: GSM479714
400006170: GSM479718
400006172: GSM479720
400006173: GSM479721
400006174: GSM479722
400006178: GSM479726
400006179: GSM479727
400006180: GSM479728
0
samples selected
Move selected samples to group
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Name
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!Sample Title
Any inhaled cs use 0=no 1=yes
Any intranasal cs use 0=no 1=yes
Any relevant respiratory infections 0=no 1=yes
Any systemic cs use 0=no 1=yes
Atopy status
Bactin-gapdh 5' 3' ratio
Baseline severity nih guideline
Bmi
Cell type
Country
Days from visit to sample collection
Days since quiet visit
Donor
Exacerbation visit subgroup based on k-means clustering
Fasting status
Fev1 predicted
History of acid reflux 0=no 1=yes
Ige level
Initial processing lab
Leukotriene receptor antagonist use 0=no 1=yes
Lims hyb id
Lims src id
Maximum steroid exposure 4=systemic 3=inhaled 2=intranasal 1
Phase
Race
Ratio of monocytes to lymphocytes whole blood
Rn source key current
Rna extract srckey
Sa key
Sample collection date
Software analysis key current
Visit number
Reset Group Set
This will remove all current groups and create one group with all samples! Are you sure you want to reset?
Create Subset
Select which information you'd like to copy from the current sample set to your new subset.
Options
Copy all annotations
Copy all files
Group Settings
Group
EXACERBATION
FOLLOW_UP
QUIET
Name
Display Order
Move
Move this group to
before
after
EXACERBATION
FOLLOW_UP
QUIET
Move
Color
Create Groups
Split by
!Sample Title
Any inhaled cs use 0=no 1=yes
Any intranasal cs use 0=no 1=yes
Any relevant respiratory infections 0=no 1=yes
Any systemic cs use 0=no 1=yes
Atopy status
Bactin-gapdh 5' 3' ratio
Baseline severity nih guideline
Bmi
Cell type
Country
Days from visit to sample collection
Days since quiet visit
Donor
Exacerbation visit subgroup based on k-means clustering
Fasting status
Fev1 predicted
History of acid reflux 0=no 1=yes
Ige level
Initial processing lab
Leukotriene receptor antagonist use 0=no 1=yes
Lims hyb id
Lims src id
Maximum steroid exposure 4=systemic 3=inhaled 2=intranasal 1
Phase
Race
Ratio of monocytes to lymphocytes whole blood
Rn source key current
Rna extract srckey
Sa key
Sample collection date
Software analysis key current
Visit number
(split into
685
groups)
Ex:
Donor: 673; Visit Number: 50; Visit Type: QUIET, Donor: 818; Visit Number: 60; Visit Type: QUIET, Donor: 453; Visit Number: 40; Visit Type: QUIET, Donor: 452; Visit Number: 50; Visit Type: QUIET, Donor: 722; Visit Number: 50; Visit Type: QUIET
Name by
Appending column name to group name
Using column name
Create Groups
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1.70.7-stable-gxb1-release